Data: Sj bulkRNA larval stages

  • zglu
  • Saturday, Nov 30, 2024
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S. japonicum bulk RNA-seq covering larval stages from Cheng et al 2022. Data was mapped to the HuSjv3 genome and TPM was used for normalization.

Original publication: https://doi.org/10.1371/journal.pntd.0009889

The authors kindly provided TPM values for all samples in Table S2, which I used to construct the dataset. The RNA-seq reads were mapped to the HuSjv3 genome (gene id prefx “Sjc_"), which is unfortunately not available yet on WormBase Parasite.